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Physical Chemistry

Working Paper

How Wide Is the Window Opened by High-Resolution Relaxometry on the Internal Dynamics of Proteins in Solution?

Albert Smith, Nicolas Bolik-Coulon, Matthias Ernst, Beat Meier, Fabien Ferrage

Version 2 posted 03 March 2021

327

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Theoretical and Computational Chemistry

Working Paper

Unraveling Motion in Proteins by Combining NMR Relaxometry and Molecular Dynamics Simulations: A Case Study on Ubiquitin

Candide Champion, Marc Lehner, Albert A. Smith, Fabien Ferrage, Sereina Riniker

Version 1 posted 22 November 2023

251

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Biological and Medicinal Chemistry

Working Paper

Molecular Driving Force of a Small Molecule-Induced Protein Disorder-Order Transition

Cesar Mendoza-Martinez, Arun Gupta, Salomé Llabrés, Paul Barlow, Julien Michel

Version 2 posted 25 March 2024

268

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Theoretical and Computational Chemistry

Working Paper

Characterizing Discrete Binding Conformations of T4 L99A via Markov State Modeling

Chris Zhang, Meghan Osato, David Mobley

Version 1 posted 11 March 2024

197

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Theoretical and Computational Chemistry

Review

Molecular Similarity: Theory, Applications, and Perspectives

Kenneth Lopez Perez, Juan Avellaneda Tamayo, Lexin Chen, Edgar Lopez Lopez, K. Euridice Juarez Mercado, Jose Luis Medina Franco, Ramon Miranda-Quintana

Version 1 posted 24 November 2023

813

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Inorganic Chemistry

Working Paper

Engineering a Conformationally Switchable Artificial Metalloprotein

Saman Fatima, David G. Boggs, Peter J. Thompson, Noor Ali, Megan C. Thielges, Jennifer Bridwell-Rabb, Lisa Olshansky

Version 1 posted 20 September 2022

347

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Biological and Medicinal Chemistry

Working Paper

Structure and dynamics of macrophage infectivity potentiator proteins from pathogenic bacteria and protozoans bound to fluorinated pipecolic acid inhibitors

Victor Hugo Pérez Carrillo, Jacob Whittaker, Christoph Wiedemann, Jean-Martin Harder, Theresa Lohr, Anil Jamithireddy, Marina Dajka, Benedikt Goretzki, Benesh Joseph, Albert Guskov, Nicholas Harmer, Ulrike Holzgrabe, Ute Hellmich

Version 1 posted 24 May 2024

42

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Analytical Chemistry

Working Paper

Gas Phase Stability of Protein Ions in a Cyclic Ion Mobility Spectrometry Travelling Wave Device

Charles Eldrid, Jakub Ujma, Symeon Kalfas, nick tomczyk, Kevin Giles, mike morris, Konstantinos Thalassinos

Version 1 posted 28 November 2018

943

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1

Citations

Biological and Medicinal Chemistry

Working Paper

Protein Flexibility Catalyzes a Cell Signaling Reaction of the Ras-GAP Complex

Keiei Kumon, Masahiro Higashi, Shinji Saito, Shigehiko Hayashi

Version 1 posted 20 August 2019

529

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Theoretical and Computational Chemistry

Working Paper

Combining Virtual Reality Visualization with Ensemble Molecular Dynamics to Study Complex Protein Conformational Changes

Jordi Juárez-Jiménez, Philip Tew, Michael o'connor, Salome Llabres, Rebecca Sage, David Glowacki, Julien Michel

Version 3 posted 07 October 2020

1,091

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26 results in Protein dynamics in Keywords: Protein dynamics

How Wide Is the Window Opened by High-Resolution Relaxometry on the Internal Dynamics of Proteins in Solution?

Unraveling Motion in Proteins by Combining NMR Relaxometry and Molecular Dynamics Simulations: A Case Study on Ubiquitin

Molecular Driving Force of a Small Molecule-Induced Protein Disorder-Order Transition

Characterizing Discrete Binding Conformations of T4 L99A via Markov State Modeling

Molecular Similarity: Theory, Applications, and Perspectives

Engineering a Conformationally Switchable Artificial Metalloprotein

Structure and dynamics of macrophage infectivity potentiator proteins from pathogenic bacteria and protozoans bound to fluorinated pipecolic acid inhibitors

Gas Phase Stability of Protein Ions in a Cyclic Ion Mobility Spectrometry Travelling Wave Device

Protein Flexibility Catalyzes a Cell Signaling Reaction of the Ras-GAP Complex

Combining Virtual Reality Visualization with Ensemble Molecular Dynamics to Study Complex Protein Conformational Changes

26 results in Keywords: Protein dynamics