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Theoretical and Computational Chemistry

Working Paper

Free Energy Analysis of Peptide-Induced Pore Formation in Lipid Membranes by Bridging Atomistic and Coarse-Grained Simulations

Joshua Richardson, Reid Van Lehn

Version 1 posted 20 May 2024

312

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Analytical Chemistry

Working Paper

Structural analysis of four cyclic antimicrobial hexapeptides in aqueous solution and in micelles, towards membrane-mimicking nanodiscs

Fredrik G. Rylandsholm, Philip Rainsford, Monika Krupova, Tone Kristoffersen, Tonje Haugen, Bjørn Olav Brandsdal, John Sigurd Svendsen, Johan Isaksson

Version 1 posted 11 September 2024

420

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Biological and Medicinal Chemistry

Working Paper

Design of antimicrobial peptides containing non-proteinogenic amino acids using multi-objective Bayesian optimisation

Yuki Murakami, Shoichi Ishida, Yosuke Demizu, Kei Terayama

Version 2 posted 15 May 2023

294

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Analytical Chemistry

Working Paper

Label-free measurement of antimicrobial peptide interactions with lipid vesicles and nanodiscs using microscale thermophoresis

Philip Rainsford, Fredrik Rylandsholm, Martin Jakubec, Eric Juskewitz, Mitchell Silk, Richard A. Engh, Johan Isaksson

Version 2 posted 11 November 2022

335

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1

Citations

Biological and Medicinal Chemistry

Working Paper

Can Large Language Models Predict Antimicrobial Peptide Activity and Toxicity?

Markus Orsi, Jean-Louis Reymond

Version 2 posted 12 March 2024

893

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Biological and Medicinal Chemistry

Working Paper

Mixed Chirality α-Helix in a Stapled Bicyclic and a Linear Antimicrobial Peptide Revealed by X-Ray Crystallography

stéphane Baeriswyl, Hippolyte Personne, Ivan Di Bonaventura, Thilo Köhler, Christian van Delden, Achim Stocker, Sacha Javor, Jean-Louis Reymond

Version 3 posted 13 May 2021

756

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Biological and Medicinal Chemistry

Working Paper

A Study with Peptide Dendrimers Reveals an Extreme pH Dependence of Antibiotic Activity Above pH 7.4

Xingguang Cai, Sacha Javor, Bee-Ha Gan, Thilo Köhler, Jean-Louis Reymond

Version 3 posted 01 April 2021

499

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Analytical Chemistry

Working Paper

Investigating Antimicrobial Peptide-Membrane Interactions Using Fast Photochemical Oxidation of Peptides in Nanodiscs

Deseree Reid, James Rohrbough, Marius Kostelic, Michael Marty

Version 1 posted 23 August 2021

431

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Biological and Medicinal Chemistry

Working Paper

Biosynthesis-Guided Discovery of Enteropeptins, Unusual Sactipeptides Containing an N-Methylornithine

Kenzie A. Clark, Brett C. Covington, Mohammad R. Seyedsayamdost

Version 1 posted 22 November 2021

856

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2

Citations

Biological and Medicinal Chemistry

Working Paper

Machine Learning Designs Non-Hemolytic Antimicrobial Peptides

Alice Capecchi, Xingguang Cai, Hippolyte Personne, Thilo Köhler, Christian van Delden, Jean-Louis Reymond

Version 1 posted 18 March 2021

686

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13 results in Antimicrobial peptides in Keywords: Antimicrobial peptides

Free Energy Analysis of Peptide-Induced Pore Formation in Lipid Membranes by Bridging Atomistic and Coarse-Grained Simulations

Structural analysis of four cyclic antimicrobial hexapeptides in aqueous solution and in micelles, towards membrane-mimicking nanodiscs

Design of antimicrobial peptides containing non-proteinogenic amino acids using multi-objective Bayesian optimisation

Label-free measurement of antimicrobial peptide interactions with lipid vesicles and nanodiscs using microscale thermophoresis

Can Large Language Models Predict Antimicrobial Peptide Activity and Toxicity?

Mixed Chirality α-Helix in a Stapled Bicyclic and a Linear Antimicrobial Peptide Revealed by X-Ray Crystallography

A Study with Peptide Dendrimers Reveals an Extreme pH Dependence of Antibiotic Activity Above pH 7.4

Investigating Antimicrobial Peptide-Membrane Interactions Using Fast Photochemical Oxidation of Peptides in Nanodiscs

Biosynthesis-Guided Discovery of Enteropeptins, Unusual Sactipeptides Containing an N-Methylornithine

Machine Learning Designs Non-Hemolytic Antimicrobial Peptides

13 results in Keywords: Antimicrobial peptides