Metabolic responses to zinc stress in Amaranthus caudatus roots and leaves

29 November 2022, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

During the last decades, pollution with heavy metals (HM) became an important stress factor for plants. However, due to their biochemical plasticity, plants can adjust their metabolism to ensure survival under changing environmental conditions. In the most comprehensive and straightforward way these metabolic shifts can be addressed by the untargeted mass spectrometry-based metabolomics approach. However, although this methodology is well-established for cadmium-related responses, comprehensive metabolomics studies of Zn-induced metabolic shifts are still missing. Therefore, here we propose, to the best of our knowledge, the first gas chromatography-mass spectrometry (GC-MS)-based metabolomics study of Zn2+-induced stress responses in amaranth. Thereby, 419 metabolites could be annotated and 144 of them were unambiguously identified. The metabolic shifts were organ-specific and more pronounced in roots. The most of the responsive metabolites were up-regulated and dominated with sugars and, to a lesser extent, TCA-related organic acids (a total of 51 and 41, respectively) that could be attributed to their involvement in osmoregulation, ROS scavenging and complexation of Zn2+ ions. Galactose was the most Zn2+-responsive root sugar that indicated its possible role in Zn2+ ion binding to the root cell walls. A 59-fold increase of gluconate content in roots clearly indicated its involvement in Zn2+ chelation. A high Zn2+–induced up-regulation of salicylic acid in roots and shoots suggested a key role of this hormone in the activation of Zn2+ stress tolerance mechanisms. Thus, our study provides the first insight in the general trends in Zn-induced biochemical rearrangements and main adaptive metabolic shifts in A. caudatus plants.

Keywords

Amaranthus caudatus
heavy metals
zinc
Zn2+ stress
GC-MS-based metabolomics
metabolic adjustment
gluconate
salicylate

Supplementary materials

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Title
Metabolic responses to zinc stress in Amaranthus caudatus roots and leaves. Supplementary Information 1
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Directory Table S1-1. Gas chromatographic (GC) separation conditions and electron ionization-quadrupole-mass spectrometry (EI-Q-MS) settings for analysis of Amaranthus caudatus primary polar thermally stabile metabolites. Table S1-2. Metabolites analized by untargeted gas chromatography-electron ionization-quadrupole mass spectrometry (GC-EI-Q-MS) approach in dry methanolic extracts obtained from young and mature leaves and roots of A. caudatus Zn2+-treated and control plants. Table S1-3. Zn2+-regulated metabolites in A. caudatus young leaves. Table S1-4. Zn2+-regulated metabolites in A. caudatus roots. Figure S1-1. Metabolic response of A. caudatus mature leaves to Zn2+-treatment. Table S1-5. Zn2+-regulated metabolites in mature leaves of Amaranthus caudatus. Table S1-6. Changes in content of metabolites detected by GCMS targeted analysis in mature leaves of A. caudatus in response to Zn2+ treatment. Figure S1-2. Pathway Analysis of the Zn2+-regulated metabolites of A. caudatus mature leaves annotated by untargeted GC-EI-Q-MS. Table S1-7. Zn2+-responsive metabolic pathways in A. caudatus mature leaves.
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Metabolic responses to zinc stress in Amaranthus caudatus roots and leaves. Supplementary Information 2
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Part 1. Metabolic pathways of Pathway Analysis for Zn2+-regulated metabolites in young leaves of Amaranthus caudatus. Part 2. Metabolic pathways of Pathway Analysis for Zn2+-regulated metabolites in roots of A. caudatus. Part 3. Metabolic pathways of Pathway Analysis for Zn2+-regulated metabolites in mature leaves of A. caudatus.
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Osmolovskaya et al. Supplementary Information 3.1.
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Young leaves Pathway Analysis Report
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Osmolovskaya et al. Supplementary Information 3.2.
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Roots Pathway Analysis Report
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Osmolovskaya et al. Supplementary Information 3.3.
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Mature leaves Pathway Analysis Report
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