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De novo Sequencing and Native Mass Spectrometry Reveals Hetero-Association of Dirigent Protein Homologs and Potential Interacting Proteins in Forsythia × intermedia

Mowei Zhou, Joseph Laureanti, Callum Bell, Mi Kwon, Qingyan Meng, Irina Novikova, Dennis Thomas, Carrie Nicora, Ryan Sontag, Diana Bedgar, Isabelle O’Bryon, Eric Merkley, Bojana Ginovska, John Cort, Laurence Davin, Norman Lewis

Version 1 posted 17 August 2021

428

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Biological and Medicinal Chemistry

Working Paper

Strategic Design of Catalytic Lysine-Targeting Reversible Covalent BCR-ABL Inhibitors

David Quach, Guanghui Tang, Jothi Anantharajan, Nithya Baburajendran, Anders Poulsen, John Wee, Priya Retna, Rong Li, Boping Liu, Doris Tee, Perlyn Kwek, Joma Joy, Wan-Qi Yang, Chong-Jing Zhang, Klement Foo, Thomas Keller, Shao Yao

Version 1 posted 04 February 2021

1,628

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Analytical Chemistry

Working Paper

Combined Metabolic and Chemical (CoMetChem) Labeling Using Stable Isotopes – a Strategy to Reveal Site-Specific Histone Acetylation and Deacetylation Rates by LC-MS

Alienke van Pijkeren, Jörn Dietze, Alejandro Sánchez Brotons, Tim Lijster, Andrei Barcaru, Anna-Sophia Egger, Madlen Hotze, Frank J. Dekker, Peter Horvatovich, Barbro Melgert, Mathias Ziegler, Kathrin Thedieck, Ines Heiland, Rainer Bischoff, Marcel Kwiatkowski

Version 2 posted 22 February 2021

385

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Analytical Chemistry

Working Paper

Mapping the Proteoform Landscape of Five Human Tissues

Bryon Drown, Kevin Jooß, Rafael Melani, Cameron Lloyd-Jones, Jeannie Camarillo, Neil Kelleher

Version 1 posted 19 January 2022

344

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Analytical Chemistry

Working Paper

psm_utils: A high level Python API for parsing and handling peptide-spectrum-matches and proteomics search results

Ralf Gabriels, Arthur Declercq, Robbin Bouwmeester, Sven Degroeve, Lennart Martens

Version 1 posted 03 October 2022

255

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1

Citations

Organic Chemistry

Working Paper

Thiomethyltetrazines are Reversible Covalent Cysteine Warheads whose Dynamic Behavior can be "Switched off” via Bioorthogonal Chemistry Inside Live Cells

Amanda Tallon, Yingrong Xu, Graham West, Christopher am Ende, Joseph Fox

Version 1 posted 02 May 2023

1,032

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Biological and Medicinal Chemistry

Review

The Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

Eric W Deutsch, Juan Antonio Vizcaíno, Andrew R Jones, Pierre-Alain Binz, Henry Lam, Joshua Klein, Wout Bittremieux, Yasset Perez-Riverol, David L Tabb, Mathias Walzer, Sylvie Ricard-Blum, Henning Hermjakob, Steffen Neumann, Tytus D Mak, Shin Kawano, Luis Mendoza, Tim Van Den Bossche, Ralf Gabriels, Nuno Bandeira, Jeremy Carver, Benjamin Pullman, Zhi Sun, Nils Hoffmann, Jim Shofstahl, Yunping Zhu, Luana Licata, Federica Quaglia, Silvio CE Tosatto, Sandra E Orchard

Version 1 posted 17 October 2022

479

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1

Citations

Analytical Chemistry

Working Paper

Simultaneous N-deglycosylation and digestion of complex samples on S-Traps enables efficient glycosite hypothesis generation

Christine DeRosa, Simon Weaver, Chien-Wei Wang, Naviya Schuster-Little, Rebecca Whelan

Version 1 posted 04 November 2022

194

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Analytical Chemistry

Working Paper

Orbitrap mass spectrometry and high-field asymmetric waveform ion mobility spectrometry (FAIMS) enable the in-depth analysis of human serum proteoforms

Jake Kline, Michael Belford, Cornelia Boeser, Romain Huguet, Ryan Fellers, Joseph Greer, Sylvester Greer, David Horn, Kenneth Durbin, Jean-Jacques Dunyach, Nagib Ahsan, Luca Fornelli

Version 1 posted 20 February 2023

447

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1

Citations

Biological and Medicinal Chemistry

Working Paper

ProteomicsML: An Online Platform for Community-Curated Datasets and Tutorials for Machine Learning in Proteomics

Tobias Rehfeldt, Ralf Gabriels, Robbin Bouwmeester, Siegfried Gessulat, Benjamin Neely, Magnus Palmblad, Yasset Perez-Riverol, Tobias Schmidt, Juan Antonio Vizcaíno, Eric Deutsch

Version 1 posted 05 October 2022

420

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1

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Refine Search

57 results in Proteomics in Keywords: Proteomics

De novo Sequencing and Native Mass Spectrometry Reveals Hetero-Association of Dirigent Protein Homologs and Potential Interacting Proteins in Forsythia × intermedia

Strategic Design of Catalytic Lysine-Targeting Reversible Covalent BCR-ABL Inhibitors

Combined Metabolic and Chemical (CoMetChem) Labeling Using Stable Isotopes – a Strategy to Reveal Site-Specific Histone Acetylation and Deacetylation Rates by LC-MS

Mapping the Proteoform Landscape of Five Human Tissues

psm_utils: A high level Python API for parsing and handling peptide-spectrum-matches and proteomics search results

Thiomethyltetrazines are Reversible Covalent Cysteine Warheads whose Dynamic Behavior can be "Switched off” via Bioorthogonal Chemistry Inside Live Cells

The Proteomics Standards Initiative at Twenty Years: Current Activities and Future Work

Simultaneous N-deglycosylation and digestion of complex samples on S-Traps enables efficient glycosite hypothesis generation

Orbitrap mass spectrometry and high-field asymmetric waveform ion mobility spectrometry (FAIMS) enable the in-depth analysis of human serum proteoforms

ProteomicsML: An Online Platform for Community-Curated Datasets and Tutorials for Machine Learning in Proteomics

57 results in Keywords: Proteomics