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Theoretical and Computational Chemistry

Working Paper

Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics.

Cristina Paissoni, Alexander Jussupow, Carlo Camilloni

Version 2 posted 29 November 2019

881

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Catalysis

Working Paper

Engineering Protein Dynamics of Ancestral Luciferase

Andrea Schenkmayerova, Gaspar Pinto, Martin Toul, Martin Marek, Lenka Hernychova, Joan Planas-Iglesias, Veronika Liskova, Daniel Pluskal, Michal Vasina, Stephane Emond, Mark Doerr, Radka Chaloupková, David Bednar, Zbynek Prokop, Florian Hollfelder, Uwe T. Bornscheuer, Jiri Damborsky

Version 1 posted 17 August 2020

383

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1

Citations

Biological and Medicinal Chemistry

Working Paper

Protein Flexibility Catalyzes a Cell Signaling Reaction of the Ras-GAP Complex

Keiei Kumon, Masahiro Higashi, Shinji Saito, Shigehiko Hayashi

Version 1 posted 20 August 2019

543

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Theoretical and Computational Chemistry

Working Paper

Long-Range Entropic Effects on Protein Intrinsically Disordered Regions

Joao Victor de Souza Cunha, Agnieszka K. Bronowska

Version 1 posted 12 February 2019

901

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Analytical Chemistry

Working Paper

Gas Phase Stability of Protein Ions in a Cyclic Ion Mobility Spectrometry Travelling Wave Device

Charles Eldrid, Jakub Ujma, Symeon Kalfas, nick tomczyk, Kevin Giles, mike morris, Konstantinos Thalassinos

Version 1 posted 28 November 2018

968

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1

Citations

Physical Chemistry

Review

Memory unlocks the future of biomolecular dynamics: Transformative tools to uncover physical insights accurately and efficiently

Anthony Dominic III, Siqin Cao, Andres Montoya-Castillo, Xuhui Huang

Version 2 posted 27 April 2023

372

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Inorganic Chemistry

Working Paper

Engineering a Conformationally Switchable Artificial Metalloprotein

Saman Fatima, David G. Boggs, Peter J. Thompson, Noor Ali, Megan C. Thielges, Jennifer Bridwell-Rabb, Lisa Olshansky

Version 1 posted 20 September 2022

363

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Theoretical and Computational Chemistry

Working Paper

Unraveling Motion in Proteins by Combining NMR Relaxometry and Molecular Dynamics Simulations: A Case Study on Ubiquitin

Candide Champion, Marc Lehner, Albert A. Smith, Fabien Ferrage, Sereina Riniker

Version 1 posted 22 November 2023

274

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Theoretical and Computational Chemistry

Review

Replica Exchange with Solute Tempering for Protein Conformational Sampling

Yichong Lao, Michael O’Connor, Xuhui Huang

Version 1 posted 09 August 2024

315

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Theoretical and Computational Chemistry

Review

Molecular Similarity: Theory, Applications, and Perspectives

Kenneth Lopez Perez, Juan Avellaneda Tamayo, Lexin Chen, Edgar Lopez Lopez, K. Euridice Juarez Mercado, Jose Luis Medina Franco, Ramon Miranda-Quintana

Version 1 posted 24 November 2023

1,068

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Refine Search

28 results in Protein Dynamics in Keywords: Protein Dynamics

Determination of Protein Structural Ensembles by Hybrid-Resolution SAXS Restrained Molecular Dynamics.

Engineering Protein Dynamics of Ancestral Luciferase

Protein Flexibility Catalyzes a Cell Signaling Reaction of the Ras-GAP Complex

Long-Range Entropic Effects on Protein Intrinsically Disordered Regions

Gas Phase Stability of Protein Ions in a Cyclic Ion Mobility Spectrometry Travelling Wave Device

Memory unlocks the future of biomolecular dynamics: Transformative tools to uncover physical insights accurately and efficiently

Engineering a Conformationally Switchable Artificial Metalloprotein

Unraveling Motion in Proteins by Combining NMR Relaxometry and Molecular Dynamics Simulations: A Case Study on Ubiquitin

Replica Exchange with Solute Tempering for Protein Conformational Sampling

Molecular Similarity: Theory, Applications, and Perspectives

28 results in Keywords: Protein Dynamics