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Analytical Chemistry

Working Paper

Nucleo-SAFARI: Automated Identification of Fragment Ions in Top-Down MS/MS Spectra of Nucleic Acids

Michael Lanzillotti, Jennifer Brodbelt

Version 1 posted 21 June 2024

149

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Biological and Medicinal Chemistry

Working Paper

Impact of Acetylation, Succinylation, and pH on PEI-Based Polyplex Structure and Function

Nasir Uddin, Md Abu Monsur Dinar, Daniel Pack, Jason DeRouchey

Version 1 posted 09 May 2024

167

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Theoretical and Computational Chemistry

Working Paper

Molecular origin of distinct hydration dynamics in double helical DNA and RNA sequences

Elisa Frezza, Damien Laage, Elise Duboué-Dijon

Version 2 posted 29 March 2024

338

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Biological and Medicinal Chemistry

Working Paper

Accurate physics-based prediction of binding affinities of RNA and DNA targeting ligands

Ara M. Abramyan, Anna Bochicchio, Chuanjie Wu, Wolfgang Damm, David R. Langley, Devleena Shivakumar, Dmitry Lupyan, Lingle Wang, Edward Harder, Eliud O. Oloo

Version 2 posted 26 August 2024

425

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Theoretical and Computational Chemistry

Working Paper

Short-Range Imbalances in the AMBER Lennard-Jones Potential for (Deoxy)Ribose…Nucleobase Lone-pair…π Contacts in Nucleic Acids.

Klaudia Mrazikova, Jiri Sponer, Vojtech Mlynsky, Pascal Auffinger, Holger Kruse

Version 1 posted 15 September 2021

282

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Biological and Medicinal Chemistry

Working Paper

Duplex stem replacement with bPNA+ triplex hybrid stems enables reporting on tertiary interactions of internal RNA domains

Dennis Bong, Shiqin Miao, Yufeng Liang, Jie Mao, Ila Marathe

Version 2 posted 02 April 2019

1,179

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Physical Chemistry

Working Paper

Rational Design of Near-infrared Fluorescent Carbon Nanotube Biosensors with Covalent DNA-Anchors

Justus Tom Metternich, Linda Sistemich, Robert Nißler, Svenja Herbertz, Sebastian Kruss

Version 1 posted 16 February 2023

364

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Biological and Medicinal Chemistry

Working Paper

Lipid linked nucleoside triphosphates for enzymatic synthesis of hydrophobic oligonucleotides with enhanced membrane anchoring efficiency

David Kodr, Erika Kuzmova, Radek Pohl, Tomas Kraus, Michal Hocek

Version 1 posted 09 December 2022

196

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Physical Chemistry

Working Paper

On the interactions between RNA and titrateable lipid layers: Implications for RNA delivery with lipid nanoparticles

Jennifer Gilbert, Inna Ermilova, Marco Fornasier, Maximilian Skoda, Giovanna Fragneto, Jan Swenson, Tommy Nylander

Version 2 posted 10 July 2023

469

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Analytical Chemistry

Working Paper

A High-Throughput Workflow for Mass Spectrometry Analysis of Nucleic Acids by Nanoflow Desalting

Michael Lanzillotti, Jennifer Brodbelt

Version 1 posted 29 November 2023

265

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Refine Search

13 results in Nucleic Acids in Keywords: Nucleic Acids

Nucleo-SAFARI: Automated Identification of Fragment Ions in Top-Down MS/MS Spectra of Nucleic Acids

Impact of Acetylation, Succinylation, and pH on PEI-Based Polyplex Structure and Function

Molecular origin of distinct hydration dynamics in double helical DNA and RNA sequences

Accurate physics-based prediction of binding affinities of RNA and DNA targeting ligands

Short-Range Imbalances in the AMBER Lennard-Jones Potential for (Deoxy)Ribose…Nucleobase Lone-pair…π Contacts in Nucleic Acids.

Duplex stem replacement with bPNA+ triplex hybrid stems enables reporting on tertiary interactions of internal RNA domains

Rational Design of Near-infrared Fluorescent Carbon Nanotube Biosensors with Covalent DNA-Anchors

Lipid linked nucleoside triphosphates for enzymatic synthesis of hydrophobic oligonucleotides with enhanced membrane anchoring efficiency

On the interactions between RNA and titrateable lipid layers: Implications for RNA delivery with lipid nanoparticles

A High-Throughput Workflow for Mass Spectrometry Analysis of Nucleic Acids by Nanoflow Desalting

13 results in Keywords: Nucleic Acids