OPES-Enhanced Machine Learning Potentials Capture Node-Assisted Diffusion and Ring-Opening in SALEM-2

02 July 2025, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Machine learning potentials (MLPs) can help bridge the length- and time-scale gaps required to study functional nanoporous materials at ab initio accuracy. MLPs are usually trained using quantum chemical data obtained from traditional molecular dynamics (MD) simulations. These MD simulations predominantly sample near-equilibrium configurations on the potential energy surface. This often limits the MLPs ability to accurately describe less favorable, high-energy configurations. We address this challenge by introducing an active learning framework based on the On-the-fly-Probability-Enhanced-Sampling (OPES) method. Using imidazole diffusion in the SALEM-2 metal-organic framework (MOF) as an example, our approach employs a time-dependent OPES bias with expanded temperature- and distance-based collective variables. This allows extended MD simulations of linker molecule diffusion over 5 ns with ab initio accuracy. Interestingly, our simulations reveal a novel ring-opening phenomenon during imidazole diffusion across the four-membered window. This process, which is not captured by classical potentials, suggests the advantage of using OPES-based training curricula to study diffusion in MOFs.

Keywords

Active Learning
Machine Learning Potentials
Density Functional Theory
Molecular Dynamics
On-the-fly-Probability-Enhanced-Sampling
Metal-Organic Frameworks
Ring-Opening
Diffusion

Supplementary materials

Title
Description
Actions
Title
Supporting Information: OPES-Enhanced Machine Learning Potentials Capture Node-Assisted Diffusion and Ring-Opening in SALEM-2
Description
SI for the paper
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.