Redox potentials and solvation free energies energies from an efficient electrostatic embedding QM/MM thermodynamic integration approach

26 June 2025, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Periodic boundary condition-adapted formulations of quantum mechanics/molecular mechanics (QM/MM) methods enable the extraction of accurate free energies, provided that efficient phase-space sampling is achieved. In this work, we develop a thermodynamic integration scheme based on an electrostatic embedding QM/MM approach for efficiently computing solvation energies and redox potentials in condensed-phase systems. This method is compatible with both ab initio DFT and semi-empirical DFTB QM/MM frameworks in periodic boundary conditions (PBC). Our PBC-adapted QM/MM model employs a mixed particle–mesh Ewald (PME) scheme for QM–MM interactions and an Ewald pair potential for QM–QM interactions, enhancing computational efficiency. For solvation free energies, we introduce two coupling parameters to decouple electrostatic and van der Waals interactions. Redox potentials are computed using a fractional electron occupation scheme interpolating between N- and N±1-electron states. The method is applied to aqueous solvation of amino acid analogues and to redox processes in water, yielding results in good agreement with experimental data. This approach enables robust and accurate free energy predictions in realistic condensed-phase environments.

Keywords

QM/MM
PBC
free energy
redox potential
thermodynamic integration

Supplementary materials

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Title
Supporting Information: Redox potentials and solvation free energies energies from an efficient electrostatic embedding QM/MM thermodynamic integration approach
Description
Contains detailed derivation of equations reported in main text, plots of the convergency of thermodynamic integration calculations and tables comparing average Mulliken charges and point charges used in reference simulations.
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