Electromechanical Switching in DNA-CNT supramolecular structures

13 June 2025, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

The characteristics of the interface between DNA and metallic carbon nanotube (CNT) in supramolecular assemblies are important to understand for electronic and sensing applications. We study the mechanical stability and electronic properties of these interfaces with amino and ester linkers, using large-scale computational experiments. Our study demonstrates that both linkers significantly enhance the mechanical stability of DNA-CNT systems, with the DNA adopting a stable and lower energy perpendicular orientation relative to the CNT as opposed to a conventional parallel arrangement. This lower energy configuration is driven by π‘π‘–βˆ’π‘π‘– stacking between DNA and CNT. Our calculations also reveal that interface resistance is primarily governed by DNA-CNT interactions with negligible contribution from the linkers. In the case of the amino linker, we predict a 100-fold transmission ratio between parallel and perpendicular configurations of DNA relative to CNT. This observation can be used to build an electromechanical switch with fast switching times (30 ns). The ester linker on the other hand enables a better electronic coupling between the DNA and CNT even when strained.

Keywords

Single-walled carbon nanotubes (SWCNTs)
DNA
Charge transport
Molecular dynamics simulations

Supplementary materials

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Supplementary Figures and Methodology
Description
The Supplementary Information provides detailed methodology for MD, DFT, and charge transport calculations, includes partial charge data, and presents additional figures of initial structures, RMSF, and DOS analyses.
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