A Potentially Prebiotic Synthesis of a 3′-Amino-3′-deoxyribonucleoside

23 May 2025, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

A central challenge in origins of life research is understanding how primitive genetic polymers could have replicated nonenzymatically prior to the evolution of macromolecular catalysts. Such a process would have required the formation of inter-nucleotide linkages, high fidelity in nucleobase pairing, and the ability to produce oligomers of sufficient length within short timescales. While modern ribozymes capable of catalyzing phosphodiester bond formation provide a model for RNA-based catalysis, they require a typical minimum length of ~50 nucleotides, a size unlikely to arise spontaneously without enzymatic intervention. Studies have demonstrated that the substitution of the canonical 3′-OH group with the much more nucleophilic 3′-NH2 group significantly enhances nonenzymatic template-directed oligomerization, and may have enabled early genetic polymers to bypass the need for enzymatic catalysis. Here, we report the synthesis of a 3′-amino-3′-deoxyribocytidine from prebiotic feedstocks. Our results support the hypothesis that 3′-amino-modified ribonucleotides could have served as substrates for the nonenzymatic synthesis of phosphoramidate nucleic acids on the early Earth prior to the emergence of RNA and ribozymes.

Keywords

Prebiotic chemistry
Origins of Life
Aminonucleosides

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