p-Alkoxy Substituted Anisomycins with Potent Anti-Trypanosomiasis Activity and Expanded Modes of Action

20 May 2025, Version 2

Abstract

Neglected tropical diseases caused by trypanosomatid parasites such as Leishmania, Trypanosoma brucei and Trypanosoma cruzi present a major public healthcare issue due in part to emerging resistance. Exploring multiple targeting ligands, conjugates composed of analogs from the ribosomal inhibitor anisomycin and glycosomal inhibitory almiramide peptides were made and shown to be inactive compared to the parent components. On the other hand, attachment of walkynyl chains characteristic of the lipid tails of anti-parasitic peptides to the p-position of anisomycin, gave ethers exhibiting potent activity, rivalling that of the parent ribosomal inhibitor, especially against resistant Leishmania strains. Cryo-electron microscopy revealed that the O-propargyl anisomycin analog bound similarly to the highly conserved peptidyl transferase center of the ribosome as the parent inhibitor. Thermal proteomic profiling and gene ontology analysis demonstrated that O-propargyl anisomycin exhibited a broader mode of action including activity against glycosome-associated proteins. Structure-activity study has revealed the utility of alkynyl substituents for improving antiparasitic activity against resistant strains by enlarging mode of action paving the way towards novel therapy against trypanosomatid infections.

Keywords

Neglected Tropical Diseases
Multiple targeting ligands
Ribosome
Cryo-electron microscopy
Thermal proteomic profiling
gene ontology analysis
Trypanosomatid parasites
glycosome

Supplementary materials

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Quantitative Analysis of Protein Processes (Bubble Plot)
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This file contains the raw and processed data used to generate the bubble plot presented in the main manuscript. Each entry corresponds to a protein involved in distinct biological processes, along with associated quantitative metrics.
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Molecular formula strings of target compounds with associated biological data
Description
This file provides the molecular formula strings with SMILES representations of synthesized compounds 20-29 that are evaluated against target to support the hypothesis of multiple targeted ligands of the study.
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Charecterizations
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HPLC, 1H and 13C{1H} NMR, and analytical characterization of compounds 13-29 and intermediates
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Cryo-EM Identified Pockets and Thermal Proteome Shift Data of compounds 7 and 20
Description
This supporting information file presents structural and proteomic data for compounds 7 and 20. Cryo-electron microscopy (Cryo-EM), highlighting predicted and experimentally observed interaction regions within relevant target proteins. Thermal Proteome Profiling (TPP) shift data showing significant stabilization or destabilization of proteins upon treatment with compounds 7 and 20. Common protein targets affected by both compounds, suggesting convergent or complementary mechanisms of action.
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Supplementary weblinks

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