Abstract
Explainable machine learning can aid in deriving chemical rules which in combination with inverse molecular design methods can support humans to optimise classes of molecules such as pesticides. This study demonstrates that pesticide vapour pressures can be predicted (77.1% within one order of magnitude) using kernel ridge regression on quantum chemical molecular properties but the model lacks interpretability. However, insights (via Shapley additive explanations) can be gained when a framework of functional groups is employed instead. A functional group-based model (66.7% within one order of magnitude) reveals that aromatic compounds, sulfonic acid derivatives, and carboxylic acid derivatives influence the vapour pressure the most. SHAP value trends indicate a linear relationship between reduced vapour pressure and the frequency of functional groups. A provided list of functional group contributions enables molecular modifications to optimise pesticide vapour pressures.
Supplementary materials
Title
Supporting Information: Use of functional groups for vapour pressure prediction of pesticides
Description
Supporting information including pearson coefficients, functional group clustering, hyper parameters, correlation between QM properties and SHAP values, and functional group slopes
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Title
Functional group composition
Description
This file contains the calculated vapour pressures with COSMO and the functional group composition of all molecules after the clustering procedure as outlined in the SI.
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Supplementary weblinks
Title
SEPIA app
Description
The SEPIA app includes all results of the quantum chemical calculations performed for this project.
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