Effect of Chalcogen Interaction on the Structure of Methine-Bridged Trichalcogenophenes

17 March 2025, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Polythienylenemethylidenes (PTMs) are promising conjugated polymers for organic electronics owing to their narrow bandgaps and extended π-conjugation. However, their stereochemistry remains unexplored. In this study, methine-bridged trithiophene and trifuran analogs were synthesized to investigate stereochemistry and chalcogen bonding effects. The compounds were obtained as mixtures of ZZ, EZ, and EE geometric isomers, established through detailed NMR analyses. At thermal equilibrium, the ZZ isomer predominated in trithiophene (ZZ:EZ:EE = 58:35:6), whereas trifuran showed a near-statistical distribution. X-ray crystallography revealed intramolecular S···S chalcogen bonding in trithiophene with S···S distances (≈3.04 Å) shorter than van der Waals radii and C–S···S angles of 171°. DFT calculations corroborated these findings and quantified the chalcogen bonding through lone pair LP(S)→σ*(S–C) donor-acceptor orbital interactions. Trithiophene exhibited a unique dual-chalcogen bonding mode in the ZZ configuration. These findings elucidate the role of chalcogen bonding in stabilizing ZZ-trithiophenes and contribute to designing PTMs with controlled stereochemistry for organic electronics applications.

Keywords

chalcogen bonding
conjugation
diastereoselectivity
non-covalent interactions
thiophene

Supplementary materials

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Description
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Supporting Information
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Experimental details, additional spectroscopic data, X-Ray crystal structure determinations, and theoretical calculations
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Coordinates of conformer ensembles of 1X
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Coordinates of conformer ensembles of 1X
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