Assessing Accelerated Reaction Network Exploration with ChemTraYzer-TAD and PESmapping

20 December 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Developing chemical combustion mechanisms for novel bio- and e-fuels is a challenge, given that many established mechanism analogies originate from fossil fuels. This work studies the ability of two new reaction network exploration methods, ChemTraYzer-TAD and PESmapping, to suggest potentially important reaction paths to combustion mechanisms, highlighting the differences and similarities of the two methods. In the reaction space of the ethyl-2-yl formate radical combustion, all expected important reactions are found, with many additional reactions suggested by one or the other method. This shows that the combination of both methods provides an optimal exploration result, i.e. both expected and novel reaction pathways.

Keywords

molecular dynamics
mechanism development
biofuel combustion
ethyl-2-yl formate radical
automated discovery
low-temperature combustion
accelerated molecular dynamics

Supplementary materials

Title
Description
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Title
Input and Output of Simulations
Description
Necessary input files for the two exploration programs, ChemTraYzer-TAD and PESMapping to recreate the results. Optimized output geometries, energies, and entropies for each reaction mentioned in the manuscript.
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