The BEST-HMBC-HMQC experiment for pairing geminal methyl groups in Valine and Leucine side-chains.

03 December 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Methyl groups are essential probes for characterising interactions and dynamics in large proteins. HN-based triple-resonance NMR experiments are often too insensitive for methyl assignments, making a NOESY-based approach an efficient strategy. Linking geminal methyl groups in leucine and valine residues is a crucial step in such NOESY-based methyl resonance assignment strategies. This link can be established unambiguously with the 3D-HMBC-HMQC experiment, introduced for large U-[12C2H] LV-[13CH3]2-labelled proteins. Here, we introduce the BEST variant of the 3D-HMBC-HMQC experiment which provides spectra with fewer artefacts arising from the water signal and a mean increase in signal-to-noise ratio per unit time of 16% compared to the original experiment with an optimised recovery delay and further gains when compared to more commonly used recovery delays in the range of 1.5-2 s.

Keywords

NMR
Methyl resonance assignment
HMBC-HMQC

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