Predicting C-H activation through hydride affinity and homolytic bond dissociation energies

06 November 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Predicted bond dissociation energies (BDEs) can be used to identify C-H bonds that are most likely to react in H-abstraction reactions. However, in many cases, it is not clear whether the reaction oc- curs through a radical or carbocation intermediate. Thus, the C-H hydride affinity (hydricity) may be more predictive of reactive sites than BDEs. In this paper, we introduce HAlator, a quantum chemistry (QM)-based workflow for automatic computations of C–H hydricities, that we bench- mark against 35 experimentally determined C-H hydricities in DMSO. We train the ML model on a diverse dataset of 3278 C-H sites from 740 molecules with C–H hydricities obtained using the QM-based workflow. Our ML model predicts C–H hydricities with a mean absolute error (MAE) and a root mean squared error (RMSE) of 2.30 and 3.74 kcal/mol, respectively. Furthermore, we apply our QM-based workflow and ML model to 250 hydride transfer-like reactions (H abstrac- tions: C-N, C-C, C-X, carbene insertions, oxidations, and oxidative degradation). We further ex- plore the use of ALFABET, an ML model based on BDEs, and achieve a Matthew’s correlation coefficient (MCC) between 0.20 and 0.80 across the models.

Supplementary weblinks

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.