Cost-Informed Bayesian Reaction Optimization

22 April 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Bayesian optimization (BO) is an increasingly popular method for optimization and development of chemical reactions. Although effective in guiding experimental design, BO does not account for experimentation costs: testing readily available reagents under different conditions might be more cost and time-effective than synthesizing or buying additional ones. To address this issue, we present cost-informed BO (CIBO), an approach tailored for the rational planning of chemical experimentation that prioritizes the most cost-effective experiments. Reagents are used only when their anticipated improvement in reaction performance sufficiently outweighs their costs. Our algorithm tracks the available reagents, including recently acquired ones, and dynamically updates their cost during the optimization. Using literature data of Pd-catalyzed reactions, we show that CIBO reduces the cost of reaction optimization by up to 90% compared to standard BO. Our approach is compatible with any type of cost, e.g., the cost of buying equipment or compounds, waiting time, and environmental or security concerns. We believe CIBO supersedes BO in chemistry and envision applications in both traditional and self-driving laboratories for experiment planning.

Keywords

Bayesian Optimiztaion
Design of experiments
Reaction Optimization

Supplementary materials

Title
Description
Actions
Title
Supporting Information
Description
Supporting Information. Details of methods used in the manuscript.
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.