Structural and kinetic insights into the stereospecific oxidation of 2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase (HpsN) from Cupriavidus pinatubonensis

30 November 2023, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

2,3-Dihydroxypropanesulfonate (DHPS) and sulfolactate (SL) are environmentally important organosulfur compounds that play key roles as metabolic currencies in the sulfur cycle. Despite their prevalence, the pathways governing DHPS and SL production remain poorly understood. In this study, we explore the DHPS-3-dehydrogenase CpHpsN from Cupriavidus pinatubonensis, a bacterium capable of utilizing DHPS as a sole carbon source. Kinetic analysis of CpHpsN reveals a strict preference for R-DHPS, catalyzing its 4-electron oxidation to R-SL, with high specificity for NAD+ over NADP+. The 3D structure of CpHpsN, elucidated through X-ray crystallography, unveils a fold akin to E. coli histidinol dehydrogenase (HisD), albeit with key differences around the Zn2+ centre that provide the structural basis for substrate specificity. These differences arise from a change in position of a protein loop that is a key sequence that distinguishes HpsN and HisD homologues. Site-directed mutagenesis pinpoint Glu318, His319, and Asp352 as active site residues important for the catalytic activity of CpHpsN. Taxonomic and pathway distribution analysis reveals the prevalence of HpsN within different pathways of DHPS catabolism and across bacterial classes including Alpha-, Beta-, Gamma-, and Deltaproteobacteria and Desulfobacteria, emphasizing its importance in the biogeochemical sulfur cycle.

Keywords

enzyme catalysis
protein structure
biogeochemical sulfur cycle
microbial metabolism
bioinformatics

Supplementary materials

Title
Description
Actions
Title
Supplementary Information
Description
Experimental procedures, Supplementary figures and table
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.