DeepSPInN - multimodal Deep learning for molecular Structure Prediction from Infrared and NMR spectra

23 November 2023, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Molecular spectroscopy studies the interaction of molecules with electromagnetic radiation, and interpreting the resultant spectra is invaluable for deducing the molecular structures. However, it is a strenuous task that requires highly specific domain knowledge. DeepSPInN predicts the molecular structure when given Infrared and 13C Nuclear magnetic resonance spectra without referring to any pre-existing spectral databases or molecular fragment knowledge bases. DeepSPInN does this by formulating the molecular structure prediction problem as a Markov decision process (MDP) and employs Monte-Carlo tree search to explore and choose the actions in the formulated MDP. On the QM9 dataset, DeepSPInN is able to predict the molecular structure for 95.98% of the input spectra in an average time of 160 seconds for molecules with less than 10 heavy atoms. This study is the first of its kind that uses multimodal data for molecular structure prediction, and is a leap forward in automated molecular spectral analysis.

Keywords

Spectroscopy
Deep Reinforcement Learning
Molecular Structure Elucidation
MCTS

Supplementary materials

Title
Description
Actions
Title
SI for DeepSPInN
Description
Supplementary Information for DeepSPInN
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.