Studying the adsorption of emerging organic contaminants in zeolites with dispersion-corrected density functional theory calculations: From numbers to recommendations

20 November 2023, Version 2
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

It has been established that adsorption energies obtained from dispersion-corrected density functional theory (DFT) calculations show a considerable dependence on the choice of exchange-correlation functional and dispersion correction. A number of investigations have employed different approaches to compute adsorption energies of small molecules like methane, ethane, or carbon dioxide in different types of zeolites (all-silica, protonated, cation-exchanged), using reference values from high-level calculations and/or experiments. Such comparative studies are lacking for the adsorption of larger functional organic molecules such as pharmaceuticals or personal care products, despite the potential relevance for applications, e.g., in contaminant removal or drug delivery. The present study aims to fill this gap by comparing adsorption energies and, for selected cases, equilibrium structures of emerging organic contaminants adsorbed in all-silica zeolites, employing a total of 13 dispersion-corrected DFT approaches. Methods using a pairwise (D3) dispersion correction as well as non-local van der Waals density functionals were included. A comparison of adsorption energies obtained for a variety of contaminants in MOR- and FAU-type zeolites showed that absolute values vary widely, whereas qualitative trends across the set of zeolite-guest combinations are not strongly dependent on the choice of functional. For selected cluster models, DFT adsorption energies were compared to reference values obtained with coupled cluster (DLPNO-CCSD(T)) calculations. Although all DFT approaches delivered systematically more negative adsorption energies than the coupled cluster reference, the rev-vdW-DF2 functional emerged as functional for which this tendency is least pronounced.

Keywords

zeolites
density functional theory
emerging organic contaminants
host-guest interactions
dispersion interactions
benchmarking

Supplementary materials

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Results of Part 1: S1.xlsx
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Table summarising numerical results of Part 1
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Results of Part 2: S2.xlsx
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Table summarising numerical results of Part 2
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Results of Part 3: S3.xlsx
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Table summarising numerical results of Part 3
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Results of Part 1: S1_Contaminants.zip
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Part 1: DFT-optimised structures of contaminants (PDB format)
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Results of Part 1: S1_FAU.zip
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Part 1: DFT-optimised structures of adsorption complexes in FAU (PDB format)
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Results of Part 1: S1_MOR.zip
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Part 1: DFT-optimised structures of adsorption complexes in MOR (PDB format)
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Results of Part 2: S2_MOR_Configs.zip
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Part 2: DFT-optimised structures of adsorption complexes of ACA, IBU, and TCL in MOR (PDB format)
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Inputs and results of Part 3: S3_CCSD_T_ORCA.zip
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Clusters used in DLPNO-CCSD(T) calculations, outputs of ORCA calculations
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Sample input files for CP2K
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Sample inputs for CP2K calculations showing examples for the use of different dispersion-corrected exchange-correlation functionals, structure optimisations, single-point calculations, calculations for periodic and non-periodic systems
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