Regioselective glycosylation of polyphenols by family 1 glycosyltransferases: experiments and simulations

23 August 2023, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Family 1 glycosyltransferases (GT1s, UGTs) form natural product glycosides with exquisite control over regio- and stereoselectivity, representing attractive biotechnological targets. However, regioselectivity cannot be predicted and large-scale activity assessment efforts of UGTs are commonly performed via mass spectrometry or indirect assays that are blind to regioselectivity. Here, we present a large HPLC screening discriminating between regioisomeric products of 40 diverse UGTs (28.6% average pairwise sequence identity) against 32 polyphenols, identifying enzymes able to reach high glycosylation yields (≥90% in 24h) in 26/32 cases. In reactions with >50% yield, we observed perfect regioselectivity for 47% (75/158) on polyphenols presenting two hydroxyl groups, and for 30% (43/143) on polyphenols presenting ≥3 hydroxyl groups. Moreover, we developed an NMR-based procedure to identify the site of glycosylation directly on enzymatic mixtures. We further selected seven regiospecific reactions catalyzed by four enzymes on five dihydroxycoumarins. We characterized the four enzymes, showing that temperature optima are functions of the acceptor substrate, varying by up to 20°C for the same enzyme. Furthermore, we performed short molecular dynamics simulations of 311 ternary complexes (UGT, UDP-Glc, glycosyl acceptor) to investigate the molecular basis for regioselectivity. Interestingly, it appeared that most UGTs can accommodate acceptors in configurations favorable to the glycosylation of either hydroxyl. In contrast, evaluation of hydroxyl nucleophilicity appeared a strong predictor of the hydroxyl predominantly glycosylated by most enzymes.  

Keywords

Glycosyltransferase
GT1
Protein structure
Polyphenols
Regioselectivity
Molecular dynamics
Coumarins

Supplementary materials

Title
Description
Actions
Title
SI for manuscript "Regioselective glycosylation of polyphenols by family 1 glycosyltransferases: experiments and simulations"
Description
Michaelis-Menten plots, representative HPLC chromatograms, supporting figures for glycoside structure as determined by NMR, and additional experimental details
Actions
Title
Polyphenol glycosylation dataset
Description
Dataset resulting from an HPLC screening discriminating between regioisomeric products of 40 diverse UGTs against 32 polyphenols
Actions
Title
Pairwise identity matrix
Description
Pairwise identity matrix of protein sequences of the 40 UGTs in the polyphenol dataset
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.