Mapping Electronic Decoherence Pathways in Molecules

15 June 2023, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Establishing the fundamental chemical principles that govern molecular electronic quantum decoherence has remained an outstanding challenge. Fundamental questions such as how solvent and intramolecular vibrations or chemical functionalization contribute to the overall electronic decoherence remain unanswered and are beyond the reach of state-of-the art theoretical and experimental approaches. Here we address this challenge by developing a strategy to isolate electronic decoherence pathways for molecular chromophores immersed in condensed phase environments that enables elucidating how electronic quantum coherence is lost. For this, we first identify resonant Raman spectroscopy as a general experimental method to reconstruct molecular spectral densities with full chemical complexity at room temperature, in solvent, and for fluorescent and non-fluorescent molecules. We then show how to quantitatively capture the decoherence dynamics from the spectral density and identify decoherence pathways by decomposing the overall coherence loss into contributions due to individual molecular vibrations and solvent modes. We illustrate the utility of the strategy by analyzing the electronic decoherence pathways of the DNA base thymine, its nucleoside and nucleotide in water. The electronic coherences in this case decay in ∼ 30 fs. The early-time coherence loss is determined by intramolecular vibrations while the overall decay by solvent. Chemical substitution of thymine modulates the decoherence with hydrogen-bond interactions with water leading to the fastest decoherence rates. Increasing temperature leads to faster decoherence as it enhances the importance of solvent contributions but leaves the early-time decoherence dynamics intact. The developed strategy opens key opportunities to establish the connection between molecular and solvent structure and quantum decoherence as needed to develop chemical strategies to rationally modulate it.

Keywords

Quantum Dynamics
Open Quantum Systems
Spectral Densities
Chemical Design
Resonance Raman

Supplementary materials

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Title
Supplementary Information: Mapping Electronic Decoherence Pathways
Description
It includes 4 figures and 6 tables. I) Extraction the Spectral Density from Resonance Raman Spectra II) Effect of vibrational broadening on decoherence III) Extracted spectral densities for thymine and its derivatives IV) Computed resonance Raman spectra for thymine and normal modes analysis
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