Metadynamics simulations with Bohmian-style bias potential

06 April 2023, Version 2
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Here, we present a parametrization of the metadynamics simulations for reactions involving breaking the chemical bonds along a single collective variable coordinate. The parameterization is based on the similarity between the bias potential in metadynamics and the quantum potential in the De Broglie-Bohm formalism. We derive the method and test it on two prototypical reaction types: proton transfer and breaking of the cyclohexene cycle (reversed Diels-Alder reaction).

Keywords

metadynamics
molecular dynamics
bond cleavage
proton transfer

Supplementary materials

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Supporting information
Description
Here, the results of the metadynamics simulations and the additional optimizations and transition state search, are given.
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