Modular Software for Generating and Modelling Diverse Polymer Databases



Machine learning methods offer the opportunity to design new functional materials on an unprecedented scale however building the large, diverse databases of molecules on which to train such methods remains a daunting task. Automated computational chemistry modelling workflows are therefore becoming essential tools in this data-driven hunt for new materials with novel properties, since they offer a workflow by which to create and curate molecular databases without requiring significant levels of user input. This ensures well-founded concerns regarding data provenance, reproducibility and replicability are mitigated. We have developed a versatile and flexible software package, PySoftK (Python Soft Matter at King's College London), that provides flexible, automated computational workflows to create, model, and curate libraries of polymers with a minimal user intervention. PySoftK is available as an efficient, fully-tested, and easily installed Python package. Key features of the software include the wide range of different polymer topologies that can be automatically generated and fully parallelized library generation tools. It is anticipated that PySoftK will support the generation, modelling and curation of large polymer libraries to support functional materials discovery in nano- and bio-technology.


Supplementary material

Supplementary Information
Further information about the benchmarking of the code and the torsion finding function of the code.

Supplementary weblinks

Website of PySoftK
This is the code which is reported in this manuscript.