Potential-Energy Surfaces Sampled in Cremer–Pople Coordinates and Represented by Common Force Field Functionals for Small-cyclic Molecules

28 December 2022, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

The complex conformations of the cyclic moieties impact the physical and chemical properties of the molecules. In this work, we chose 22 molecules of four-, five-, and six-membered rings and performed a thorough conformational sampling using Cremer-Pople coordinates. We sampled hundreds or thousand of conformational structures including all well-known and many less well-known conformers for each molecule. We tried to represent the potential energy surfaces (PESs) by fitting the data to common analytical force field functional forms. Although the general features of PESs can be described by the essential force field functional forms, the accuracy of representation can be improved remarkably by including the torsion-bond and torsion-angle coupling terms. The best fit yields R-squared (R2) values close to 1.0 and mean absolute errors (MAEs) in energy less than 0.3 kcal/mol.

Keywords

cyclic molecules
potential-energy surfaces
Cremer-Pople coordinates
force field

Supplementary materials

Title
Description
Actions
Title
Potential-Energy Surfaces Sampled in Cremer–Pople Coordinates and Represented by Common Force Field Functionals for Small-cyclic Molecules
Description
Support information for the main manuscript.
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.