Substrate Conformation Masquerades Two different Oxidants in Aromatic C-H and C-F bond activation by Heme-dependent Tyrosine Hydroxylase

17 August 2022, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

A recently discovered heme-dependent enzyme TyrH offers a green approach for functionalizing the high-strength C-H and C-F bonds in aromatic compounds. However, there is ambiguity regarding the nature of intermediates (Cpd 0 or Cpd I) involved in activating these bonds. Herein, using comprehensive MD Simulations and hybrid QM/MM calculations, we reveal that it is Compound I (Cpd I) that acts as the primary oxidant involved in the functionalization of both the C-F and C-H bonds. Our study shows that the His88 close to the catalytic site acts as a modulator of aromaticity and is essential to initiate the C-H and C-F bond activation. The reaction proceeds via the proton abstraction from the 4-OH group of the substrate by His88, which is coupled with an electron transfer to form a single-electron reduced Cpd I-like intermediate. This species then inserts the oxygen atom into the sp3 hybridized C-H and C-F bond of the substrate. Interestingly, our mechanistic study shows that the two different conformations of the substrate are actually responsible for the C-F and C-H functionalization, which masquerades as two different characters of oxidants involved in the reaction.

Keywords

Heme enzymes
MD
QM/MM
C-H bond
C-F bond
and arenes

Supplementary materials

Title
Description
Actions
Title
Supplementary Information
Description
Supplementary Information contains RMSD, RMSF, reaction profile for S=3/2 and S=5/2 etc.
Actions

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.