Identification of a short ACE2-derived stapled peptide targeting the SARS-CoV-2 Spike protein

21 April 2022, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

The design and synthesis of a series of peptide derivatives based on a short ACE2 alpha-helix 1 epitope and subsequent [i - i+4] stapling of the secondary structure resulted in the identification of a 9-mer peptide capable to compete with recombinant ACE2 towards Spike RBD in the micromolar range. Specifically, SARS-CoV-2 Spike inhibitor screening based on colorimetric ELISA assay and structural studies by circular dichroism showed the ring-closing metathesis cyclization being capable to stabilize the helical structure of the 9-mer 34-HEAEDLFYQ-42 epitope better than the triazole stapling via click chemistry. The results are preliminary for the development of small molecule stapled peptides capable of blocking the key ACE2-Spike S1 protein-protein interaction.

Keywords

COVID-19
SARS-CoV-2
receptor-binding domain
protein-protein interaction
peptide
peptidomimetic
solid-phase synthesis
circular dichroism
ELISA assay

Supplementary materials

Title
Description
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Title
Supplementary Material
Description
Copies of HPLC chromatograms and ESI-MS spectra of 1-6, copies of 1H-ES and TOCSY-ES of 6.
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