Parasitic Behavior in Competing Chemically Fueled Reaction Cycles

24 February 2021, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Non-equilibrium reaction cycles serve as model systems of the intricate reaction networks of life. Rich and dynamic behavior is observed when such reaction cycles regulate assembly processes, such as phase separation. However, it remains unclear how the interplay between multiple reaction cycles affects the success of such assemblies. To tackle this question, we created a library of molecules that compete for a common fuel that transiently activates products. Often, the competition for fuel implies that a competitor decreases the lifetime of these products. However, in cases where the transient competitor product can phase separate, such a competitor can increase the survival time of one product. Moreover, in the presence of oscillatory fueling, the same mechanism reduces variations in the product concentration while the concentration variations of the competitor product are enhanced. Like a parasite, the product benefits from the protection of the host against deactivation and increases its robustness against fuel variations at the expense of the robustness of the host. Such a parasitic behavior in multiple fuel-driven reaction cycles represents a lifelike trait, paving the way for the bottom-up design of synthetic life.

Keywords

dissipative self-assembly
feedback mechanism
phase separation processes
fuel-driven reaction cycle
chemical competition

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