Abstract
In the present work, we have employed a molecular docking approach to
study the ability of mitocurcumin (MC), a triphenyl phosphonium conjugated curcumin
derivative, to inhibit SARS-CoV-2 infection. Computational analysis revealed
that MC can bind strongly to SARS-CoV-2 ADP Ribose Phosphatase (NSP3) with high
binding energy of -10.3 kcal/mol and to SARS-CoV-2 methyltransferase
(NSP10-NSP16 complex) with a high binding energy of -10.4 kcal/mol. We found
that MC interacts with critical residues of viral NSP3 macro-domain, known to suppress
host immune response, through hydrophobic interactions and occupies its active
site. Furthermore, MC interacts with the critical residues of NSP10-NSP16
complex, known to prevent innate immune detection of viral mRNA, through
hydrophobic and hydrogen bond interaction and occupies the methyl group donor
site. MC is also found to bind to main protease of SARS-CoV-2 and may potentially
act as an inhibitor of the viral protease. In conclusion, MC can potentially inhibit
the activity of multiple SARS-CoV-2 proteins and may accentuate the innate
immune system mediated clearance of viral load resulting in improved clinic
outcome in COVID-19 patients.