Predicting Core Level Photoelectron Spectra of Amino Acids Using Density Functional Theory

03 February 2020, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Core level photoelectron spectroscopy is a widely used technique to study amino acids. Interpretation of the individual contributions from functional groups and their local chemical environments to overall spectra requires both high-resolution reference spectra and theoretical insights, for example from density functional theory calculations. This is a particular challenge for crystalline amino acids due to the lack of experimental data and the limitation of previous calculations to gas phase molecules.
Here, a state of the art multiresolution approach is used for high precision gas phase calculations and to validate core hole pseudopotentials for plane-wave calculations. This powerful combination of complementary numerical techniques provides a framework for accurate ΔSCF calculations for molecules and solids in systematic basis sets. It is used to successfully predict C and O 1s core level spectra of glycine, alanine and serine and identify chemical state contributions to experimental spectra of crystalline amino acids.

Keywords

photoelectron spectroscopy
core level
chemical shift
density functional theory

Supplementary materials

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amino paper SI
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amino structures
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