Fromage: A Library for the Study of Molecular Crystal Excited States at the Aggregate Scale

10 September 2019, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

The study of photoexcitations in molecular aggregates faces the twofold problem of the increased computational cost associated with excited states and the complexity of the interactions among the constituent monomers. A mechanistic investigation of these processes requires the analysis of the intermolecular interactions, the effect of the environment, and 3D arrangements or crystal packing on the excited states. A considerable number of techniques have been tailored to navigate these obstacles, however they are usually restricted to in-house codes and thus require a disproportionate effort to adopt by researchers approaching the field. Herein we present the FRamewOrk for Molecular AGgregate Excitations (fromage), which implements a collection of such techniques in a Python library complemented with ready-to-use scripts. The program structure is presented and the principal features available to the user are described: geometrical analysis, exciton characterisation and a variety of ONIOM schemes. Each is illustrated by examples of diverse organic molecules in condensed phase settings. The program is available at https://github.com/Crespo-Otero-group/fromage.

Keywords

excited states
dimers
molecular crystals
electrostatic embedding
ONIOM

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