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Random Forest Machine Learning Models for Interpretable X-Ray Absorption Near-Edge Structure Spectrum-Property Relationships

submitted on 19.02.2020, 19:08 and posted on 20.02.2020, 12:43 by Steven Torrisi, Matthew Carbone, Brian Rohr, Joseph H. Montoya, Yang Ha, Junko Yano, Santosh Suram, Linda Hung
X-ray absorption spectroscopy (XAS) produces a wealth of information about the local structure of materials, but interpretation of spectra often relies on easily accessible trends and prior assumptions about the structure. Recently, researchers have demonstrated that machine learning models can automate this process to predict the coordinating environments of absorbing atoms from their XAS spectra. However, machine learning models are often difficult to interpret, making it challenging to determine when they are valid and whether they are consistent with physical theories. In this work, we present three main advances to the data-driven analysis of XAS spectra: we demonstrate the efficacy of random forests in solving two new property determination tasks (predicting Bader charge and mean nearest neighbor distance), we show that multiscale featurization can elucidate the regions and trends in spectra that encode various local properties, and we address the effect of normalization on model interpretability. The multiscale featurization transforms the spectrum into a vector of polynomial-fit features, and is contrasted with the commonly-used "pointwise" featurization that directly uses the entire spectrum as input. We find that across thousands of transition metal oxide spectra, the relative importance of features describing the curvature of the spectrum can be localized to individual energy ranges, and we can separate the importance of constant, linear, quadratic, and cubic trends, as well as the white line energy. This work has the potential to assist rigorous theoretical interpretations, expedite experimental data collection, and automate analysis of XAS spectra, thus accelerating discovery of new functional materials.


Toyota Research Institute Internal Funding


Advanced Scientific Computing Research

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Strategic Partnership Agreement FP00007929 between Lawrence Berkeley National Laboratory and Toyota Research Institute


Email Address of Submitting Author


Harvard University, Toyota Research Institute



ORCID For Submitting Author


Declaration of Conflict of Interest

We declare no conflicts of interest.

Version Notes

First version.