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AdenosineReceptorBinders_BindingNSP16_forChemRxiv_v2.pdf (617.24 kB)

Docking Adenosine Receptor Ligands to SARS-CoV2 mRNA Cap 2’-O-Methyltransferase

preprint
revised on 23.06.2020, 22:58 and posted on 25.06.2020, 12:31 by David Snyder, Shweta Mehta
This is a computational study using a high resolution crystallographic structure for the SARS-CoV2 mRNA cap 2'-O-methyltransferase (nsp16) and ligands obtained from the ZINC database. Using iGEMDOCK for docking and Desmond/Schrodinger for energy minimization, we identify adenosine receptor binders that potentially bind a previously identified adenosine binding site in SARS-CoV2 nsp16 better than adenosine does, some of which may induce conformational changes in nsp16.

History

Email Address of Submitting Author

snyderd@wpunj.edu

Institution

William Paterson University

Country

United States

ORCID For Submitting Author

0000-0001-6608-2975

Declaration of Conflict of Interest

The authors have no conflict of interest to declare.

Version Notes

Changed incorrect name for nsp16 from guanine N7 methyltransferase to 2'-O-methyltransferase

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