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2019-nCoV vs. SARS-CoV: Which Truly Has a Higher ACE2 Affinity? A Quantum Chemical Perspective on Virus-Receptor Noncovalent Interactions

preprint
submitted on 02.04.2020, 08:38 and posted on 03.04.2020, 12:58 by Nitai Sylvetsky
Noncovalent interaction energetics associated with ACE2 affinity differences are investigated using electronic structure methods; Our results were found to challenge previous predictions – claiming a higher affinity for 2019-nCoV compared to SARS-CoV based merely on "chemical intuition". In addition, we demonstrate that a broadly-used classical molecular dynamics force field – MMFF94 – is clearly incapable of reproducing DFT-based noncovalent interaction energetics for the systems at hand (despite being specifically parameterized for van der Waals interactions).

History

Email Address of Submitting Author

nitai.sylvetsky@weizmann.ac.il

Institution

Weizmann Institute of Science

Country

Israel

ORCID For Submitting Author

0000-0003-4770-2088

Declaration of Conflict of Interest

No conflict of interest

Licence

Exports