‘Ring Breaker’: Assessing Synthetic Accessibility of the Ring System Chemical Space

23 October 2019, Version 2
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Ring systems in pharmaceuticals, agrochemicals and dyes are ubiquitous chemical motifs. Whilst the synthesis of common ring systems is well described, and novel ring systems can be readily computationally enumerated, the synthetic accessibility of unprecedented ring systems remains a challenge. ‘Ring Breaker’ enables the prediction of ring-forming reactions, for which we have demonstrated its utility on frequently found and unprecedented ring systems, in agreement with literature syntheses. We demonstrate its performance on a range of ring fragments from the ZINC database and highlight its potential for incorporation into computer aided synthesis planning tools. Additionally, we generate a multi-label dataset using bipartite reaction graphs on which we train ‘Ring Breaker’ to model the relationship between one ring fragment and the multiple reactions recorded for its synthesis in the dataset; we thereby overcome the single-label approaches previously used. These approaches to ring formation and retrosynthetic disconnection offer opportunities for chemists to explore and select more efficient syntheses/synthetic routes.

Keywords

retrosynthetic analysis
retrosynthetic disconnection
Machine Learning
Computer Aided Synthesis
Computer Aided Synthesis Planning
Retrosynthetic Reaction Prediction
Retrosynthetic Prediction
Chemistry Data
Chemistry
reaction data
organic synthesis
Drug discovery
drug discovery applications
synthesis planning
Synthetic chemistry
synthesis planning tools
predictive models
ring formation reactions
heterocycles

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